PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023513374.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

C2H2

Protein Properties

Length: 264aa MW: 28879.4 Da PI: 7.0788

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023513374.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00088	101	123	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H XP_023513374.1 101 YECKTCNRRFNSFQALGGHRASH 123 99**********99999998887 PP
2	zf-C2H2	13.9	0.00016	176	198	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H XP_023513374.1 176 HECSICGLEFNSGQALGGHMRRH 198 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
METPDEFMGS NDQIHVVAVK GRRNKRMRLV CGGFEVTSSS SCGGGGGGEE FPAASSSVSG 60 EISTEEEEDM ANCLILLAQG DGHRRQRQAL HDRTKTEFYV YECKTCNRRF NSFQALGGHR 120 ASHKKPKPPP PPPIVATATA MAVEEREEAE FNKMVPVAAA ASVVTNFQIQ KGGKVHECSI 180 CGLEFNSGQA LGGHMRRHRA TAAVTTAQQQ NHHNSSGEIK RRNILELDLN LPAPEEDLRE 240 TKFQFTATPQ TIVFAAPTLV DCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	2e-49	C2H2 family protein