PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023513261.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

C2H2

Protein Properties

Length: 335aa MW: 37718.9 Da PI: 7.2797

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023513261.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	7.7e-05	170	189	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_023513261.1 170 FSCPLCFKTFNRYNNMQMHM 189 89*****************9 PP
2	zf-C2H2	15.5	4.9e-05	254	276	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk F + + ++H +++ XP_023513261.1 254 FTCRKCGKAFAVRGDWRTHEKNC 276 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MTDPYSMLHP YFSSYSSSSK SYSPYHDLFS LSYSNDNNTL KNTSSSSSSS FTTTHGSFSP 60 DSCSSPRVLP LLSLSPARHD QEHHSCRPCE DEEDEEEESV TVALHLGLPT PPSSDLILRL 120 SSTEISDKED QQEAVPVVVP NYYSSSTAGL NKGQYWIPTP AQILIGPTHF SCPLCFKTFN 180 RYNNMQMHMW GHGSQYRKGP QSLRGTQPTA MLRLPCYCCA PGCRNNIDHP RSKPLKDFRT 240 LQTHYKRKHG IKPFTCRKCG KAFAVRGDWR THEKNCGKLW HCTCGSDFKH KRSLKDHIKA 300 FGHGHAAYGI DSFDEDDEAA SEIEHDNDLS LRNGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-116	C2H2 family protein