PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023513098.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GRAS
Protein Properties Length: 538aa    MW: 60226.2 Da    PI: 6.3476
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023513098.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS450.61e-1371695382374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++ L++cA+avs++d  +aq+l+ +l++++s  g+pmqRl ay++e+L arla+s+s +yk+l+++e +    +e l+++++++ev+P++kf+++
  XP_023513098.1 169 KKILIACAKAVSDNDVLMAQWLMDELRKMVSVCGEPMQRLGAYMLEGLVARLASSGSCIYKSLRCKEPA---RAELLSYMHILYEVCPYFKFGYM 260
                     789*****************************************************************9...89********************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                      aN aI ea++ e+rvHiiDf+isqG+QW++L+qa+asRp+ pp++RiTg+++p+s   +   l  +g+rL+k+A+  +vpfef+  +a +  d+
  XP_023513098.1 261 SANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFASRPGRPPHIRITGIDDPASAyaRGGGLDIVGRRLSKLAKLYNVPFEFHS-AAISGCDV 354
                     *******************************************************9999999************************.88899*** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     + ++L++++gEalaVn++++lh+++desvs+e++rd++L+lvk+lsPkvv+vveqe+++n++ F  rf+e+l+yy a+f+s++++lpr+++eri+
  XP_023513098.1 355 QQKNLSIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTVVEQESNTNTAAFYPRFIETLDYYNAMFESIDVTLPRQHKERIN 449
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +E+++l+re+vn++acegaer+erhe l+kWr r+ +aGF+++pls+ +++++k+ll +++++ yr+ee++g+l+lgW+dr Lv+ +aW+
  XP_023513098.1 450 IEQHCLAREVVNILACEGAERVERHELLGKWRLRFAMAGFTAYPLSSLVNATIKTLLDNYSNR-YRIEEREGALYLGWMDRDLVASCAWK 538
                     *************************************************************77.*************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    
MQASQLHRDS HMSKRLCYQP IQGADTYCFS QLCSSAGNQR AQLNVDDIGD RYCTLESSSG  60
SQGYAAHNST SNVTFSSNGS TISQQDSRSN PSDQHNSIDY AYGSPVSGSS ITDDLSDFRH  120
KLRELESVML GPDSDVIDSF DSIFQEGTEN PEMGTWGQVM DVITKGSLKK ILIACAKAVS  180
DNDVLMAQWL MDELRKMVSV CGEPMQRLGA YMLEGLVARL ASSGSCIYKS LRCKEPARAE  240
LLSYMHILYE VCPYFKFGYM SANGAIAEAM KDEDRVHIID FQISQGTQWI TLIQAFASRP  300
GRPPHIRITG IDDPASAYAR GGGLDIVGRR LSKLAKLYNV PFEFHSAAIS GCDVQQKNLS  360
IRRGEALAVN FAFMLHHMPD ESVSTENHRD RLLRLVKGLS PKVVTVVEQE SNTNTAAFYP  420
RFIETLDYYN AMFESIDVTL PRQHKERINI EQHCLAREVV NILACEGAER VERHELLGKW  480
RLRFAMAGFT AYPLSSLVNA TIKTLLDNYS NRYRIEEREG ALYLGWMDRD LVASCAWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein