PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023513098.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GRAS | ||||||||
Protein Properties | Length: 538aa MW: 60226.2 Da PI: 6.3476 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 450.6 | 1e-137 | 169 | 538 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 ++ L++cA+avs++d +aq+l+ +l++++s g+pmqRl ay++e+L arla+s+s +yk+l+++e + +e l+++++++ev+P++kf+++ XP_023513098.1 169 KKILIACAKAVSDNDVLMAQWLMDELRKMVSVCGEPMQRLGAYMLEGLVARLASSGSCIYKSLRCKEPA---RAELLSYMHILYEVCPYFKFGYM 260 789*****************************************************************9...89********************* PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189 aN aI ea++ e+rvHiiDf+isqG+QW++L+qa+asRp+ pp++RiTg+++p+s + l +g+rL+k+A+ +vpfef+ +a + d+ XP_023513098.1 261 SANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFASRPGRPPHIRITGIDDPASAyaRGGGLDIVGRRLSKLAKLYNVPFEFHS-AAISGCDV 354 *******************************************************9999999************************.88899*** PP GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284 + ++L++++gEalaVn++++lh+++desvs+e++rd++L+lvk+lsPkvv+vveqe+++n++ F rf+e+l+yy a+f+s++++lpr+++eri+ XP_023513098.1 355 QQKNLSIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTVVEQESNTNTAAFYPRFIETLDYYNAMFESIDVTLPRQHKERIN 449 *********************************************************************************************** PP GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +E+++l+re+vn++acegaer+erhe l+kWr r+ +aGF+++pls+ +++++k+ll +++++ yr+ee++g+l+lgW+dr Lv+ +aW+ XP_023513098.1 450 IEQHCLAREVVNILACEGAERVERHELLGKWRLRFAMAGFTAYPLSSLVNATIKTLLDNYSNR-YRIEEREGALYLGWMDRDLVASCAWK 538 *************************************************************77.*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 538 aa Download sequence |
MQASQLHRDS HMSKRLCYQP IQGADTYCFS QLCSSAGNQR AQLNVDDIGD RYCTLESSSG 60 SQGYAAHNST SNVTFSSNGS TISQQDSRSN PSDQHNSIDY AYGSPVSGSS ITDDLSDFRH 120 KLRELESVML GPDSDVIDSF DSIFQEGTEN PEMGTWGQVM DVITKGSLKK ILIACAKAVS 180 DNDVLMAQWL MDELRKMVSV CGEPMQRLGA YMLEGLVARL ASSGSCIYKS LRCKEPARAE 240 LLSYMHILYE VCPYFKFGYM SANGAIAEAM KDEDRVHIID FQISQGTQWI TLIQAFASRP 300 GRPPHIRITG IDDPASAYAR GGGLDIVGRR LSKLAKLYNV PFEFHSAAIS GCDVQQKNLS 360 IRRGEALAVN FAFMLHHMPD ESVSTENHRD RLLRLVKGLS PKVVTVVEQE SNTNTAAFYP 420 RFIETLDYYN AMFESIDVTL PRQHKERINI EQHCLAREVV NILACEGAER VERHELLGKW 480 RLRFAMAGFT AYPLSSLVNA TIKTLLDNYS NRYRIEEREG ALYLGWMDRD LVASCAWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 0.0 | GRAS family protein |