PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023513047.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 300aa    MW: 32316.2 Da    PI: 4.5157
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023513047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00034274297123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     ++C+ C++ F +   L++H +  H
  XP_023513047.1 274 FSCKSCDRAFGSDGALQSHSKAkH 297
                     89*****************88777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MEFWGVEVKS GKPLVVKPGI QKYLHLSQAT LGEIKKDKAN ENVTIFLKIG DQKLVLGILS  60
AEKFPQLSFD LVFEKEFELS HNGKSGSVYC AGYQAFAEDQ EQDGYFDSDS GSEDEELALP  120
PAQNGKPSQK EEKSISDKSN GAKAASLKKP NVKPLEPSKD EDDESDDDDE SDEDEDSDDE  180
SDEEMLNADG GDSDDEDDDS DSDEETPKKI EPTKKRSNES ATKSTPLPAK KAKLASPGKT  240
DSKKGGHTAT PHPAKKTGKT PAAKLESPKS GGQFSCKSCD RAFGSDGALQ SHSKAKHGGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03740.11e-31C2H2 family protein