PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023513046.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 290aa    MW: 31422 Da    PI: 4.3752
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023513046.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.00012265287223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C++sF + s L++H +  H
  XP_023513046.1 265 SCKSCDRSFGSDSALQSHSKAkH 287
                     6*****************88777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MEFWGVEVKP GQALSVQPGD QKYLHLSQAT LGELKKDKAN ESVTIFVKIG DQKLVLGILS  60
AEKFPQLSFD LVFEKEFELS HNGKSGSIYC LGYQASAEDQ EHEEYSDSDF GSEDEELTLQ  120
PVQNGKPSQE EEKSIVGKNS KKAEVKSLVP SKEEGDDDSE DDDDSDEDED SDDDSDEEML  180
GADSDSDDED DGTESEEETP KKVESAKKRP NESASKTPVS KKAKVASAEK TGSKKGGHTD  240
TPHPAKKPVK TPSKAETPKS AGQVSCKSCD RSFGSDSALQ SHSKAKHGGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.27e-30C2H2 family protein