PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512990.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family LBD
Protein Properties Length: 137aa    MW: 15379.7 Da    PI: 7.2444
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512990.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260139.51.1e-4371071101
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +Ca+Ck+lrr+C+kdC++apyfp ++p kfa+vhk+FGasnv+k+l++++ ++r d++ss+vyeA+ar+rdPvyG+vg+i+ lq++++qlk +la
  XP_023512990.1   7 PCASCKLLRRRCTKDCIFAPYFPPNDPLKFAIVHKIFGASNVSKMLQNVSVDQRADTVSSIVYEANARMRDPVYGCVGIISFLQNEVSQLKMQLA 101
                     7********************************************************************************************** PP

          DUF260  96 llkeel 101
                     ++++e+
  XP_023512990.1 102 EVQAEI 107
                     *99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MEASSSPCAS CKLLRRRCTK DCIFAPYFPP NDPLKFAIVH KIFGASNVSK MLQNVSVDQR  60
ADTVSSIVYE ANARMRDPVY GCVGIISFLQ NEVSQLKMQL AEVQAEILSF QMQQPVAPMT  120
FPTTQMDQSY MFEHSSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.12e-64LBD family protein