PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023512937.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 360aa MW: 40433 Da PI: 7.9606

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023512937.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.7	2.3e-32	215	270	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W++eLH++Fv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ XP_023512937.1 215 KQRRCWSQELHRCFVSALQQLGGSHVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 270 79****************************************************97 PP
2	Myb_DNA-binding	41.9	2.3e-13	217	268	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ +v a +qlGg t+k I + m+ g+t ++ks++qky+ XP_023512937.1 217 RRCWSQELHRCFVSALQQLGGShvaTPKQIRELMQvDGLTNDEVKSHLQKYR 268 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MVLLQSELSL DFRPTFVPKT LTDFFKEVSM IGNVPDRVSK LNDFVKSLED EMRKIDAFKR 60 ELPLCMILLK DAILAVKEES LLCVVPKPQP VLEEFIPIKK ECYEEEQEDQ KNWMSSAQLW 120 KSDRKRDSKF ETKRNEKVGL VTCRNKNGER IHIPFKEFPI HALSLCTPGI KNPIEESASS 180 GSRSSGTRVV SSSTLSSLVN LRTGMQQQKQ QSSRKQRRCW SQELHRCFVS ALQQLGGSHV 240 ATPKQIRELM QVDGLTNDEV KSHLQKYRLH TRKHPVSAVT PANRSVVVLG GLLVPRVHYG 300 DSSMACSSQA GSPQGPLQLA GTGETSTTGE NSTEDDDEDD AKSESYCWKS RIQNPGIEDA

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MVLLQSELSL DFRPTFVPKT LTDFFKEVSM IGNVPDRVSK LNDFVKSLED EMRKIDAFKR  60
ELPLCMILLK DAILAVKEES LLCVVPKPQP VLEEFIPIKK ECYEEEQEDQ KNWMSSAQLW  120
KSDRKRDSKF ETKRNEKVGL VTCRNKNGER IHIPFKEFPI HALSLCTPGI KNPIEESASS  180
GSRSSGTRVV SSSTLSSLVN LRTGMQQQKQ QSSRKQRRCW SQELHRCFVS ALQQLGGSHV  240
ATPKQIRELM QVDGLTNDEV KSHLQKYRLH TRKHPVSAVT PANRSVVVLG GLLVPRVHYG  300
DSSMACSSQA GSPQGPLQLA GTGETSTTGE NSTEDDDEDD AKSESYCWKS RIQNPGIEDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	5e-48	G2-like family protein