PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512775.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 217aa    MW: 24167.2 Da    PI: 8.3251
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512775.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.9e-203080256
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +gr++AeIrd ++    ++r++lg+f++aeeAa+a+++a++ l+g+
  XP_023512775.1 30 RYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDSAEEAARAYDNAARTLRGA 80
                    59*******.**********883....5*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MRRGRPSDPF TATELPKLTV HPENPVKEIR YRGVRKRPWG RYAAEIRDPW KKTRVWLGTF  60
DSAEEAARAY DNAARTLRGA KAKTNFSLHP STISIQQQIP FYQSPPDLHD SNGYGAKIEC  120
VQANRPTSSS LSSTVESFSG PRISNPLSSL SMVRRRPVQP VSPDDCHSDC DSSSSVVDDD  180
EVCVLASFRR ALPFDLNLPP PMDVVDLTGE DGRPMLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-26ERF family protein