PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512695.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YA
Protein Properties Length: 338aa    MW: 36731 Da    PI: 7.1405
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512695.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.54e-32163219158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQyq+Il+RRq+Rak+e e+kl +k rkpylheSRh+hA+rR+RgsgGrF
  XP_023512695.1 163 QEPVFVNAKQYQGILRRRQARAKAEVENKL-IKIRKPYLHESRHQHAMRRARGSGGRF 219
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MQSKPRSVNQ LESEPPNMQQ TSSYSEPWWR SIGYNHISPP AAGGNLSNST SLECPNGASE  60
SNDGPSMSND DLNEDDDDDT TKDSHAVSYG QVQNNSQHAV SAAPTVHGGC ITQPSQLELA  120
CASNLYQDPY YAGVMAAYGH QPGYPPFLGM PHARMALPLE VTQEPVFVNA KQYQGILRRR  180
QARAKAEVEN KLIKIRKPYL HESRHQHAMR RARGSGGRFA KKNEVNSSSS TMKNKDSGSG  240
QAFSSHSAGS SGSEAAPCAL AETWNSSNGQ QEVRTQLHEV YEARSYVNGG GQFHNYSSFQ  300
ASSYALRSGE RGDDGDCSGQ QRGSISENQA AQRRLAIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.25e-68NF-YA family protein