PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512651.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C3H
Protein Properties Length: 669aa    MW: 73507.7 Da    PI: 5.9759
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512651.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.34.7e-07274294526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                     +C+ f++ GtC+ Gd C +aHg
  XP_023512651.1 274 PCPEFRK-GTCRQGDACEYAHG 294
                     8******.*************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 669 aa     Download sequence    
MCCNSKSVSP NFVMNGRFKQ GKLGLCLSVL LEFSATDDLI GFRSAVEEHG YDIDEASLWY  60
GRSIGSKKMR YEERTPLMVA AMFGSLNVLS YIVHRGCVDV NRTCGSDGPT ALHCAVAGGS  120
AVSDQVVELL LDASADASAV DANGNRPSDL IGRDFSLASY SRRKVLQQLL NGWEEDGLGS  180
SEAIFYEMET LEPVEASSSW AARDGMEKKE YPVDLSLPDI KNEMYSTDEF RMYTFKIKPC  240
TRAYSHDWTE CPFVHPGENA RRRDLRKYHY SCVPCPEFRK GTCRQGDACE YAHGIFECWL  300
HPAQYRTRLC KDETGCTRKV CFFAHKPEEL RPLYASTGSA VPSPRSICGS SLDMASISSL  360
TLGSPSALMP SSSTPPLTPT GVSSPMGGTM WQTQPPTLQL PGSRLKASLS ARDVDLDVEL  420
LSLESQRRRQ KQLIDEISCL PSPSRWNNGL STTASFPSPR SSRNGELNGL GGMKPTNLEE  480
FFGSVDPAML PQLQGLSLDS MGSQVQSPSR IPMRQSLNRS FLSSYANSIG SPPARSSQPS  540
VSAAVSVLSP RGALFTNRSQ SFIEQNAMPS NLSDWGSPNG KLDWGIHGEE LNKLRKSASY  600
GFQGSSLATP TMHATAPEPD VSWVQSLVKD TPSENSVQLS MDEQQKQQLW HLDNSDLKQM  660
YMEQEQLVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58620.11e-171C3H family protein