PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023512379.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 240aa MW: 26922.7 Da PI: 5.4869 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.7 | 1.3e-10 | 80 | 129 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ rE+ RRd++N++f eL +l + + +K +K+ iL A++ + +Lq XP_023512379.1 80 TSKACREKLRRDKLNERFLELSAVLEPG---KLPKTDKVVILSDAIRMVTDLQ 129 67889**********************9...9****************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MDDSAGNWNW LFDYSTMEDL PVVGAPFSPP QSVSFSWSNP SINFPSNKHS LEVDCSYEDL 60 DSLKEVGRKR LKAETSSAST SKACREKLRR DKLNERFLEL SAVLEPGKLP KTDKVVILSD 120 AIRMVTDLQC EIEKLKESED DLKEKIKELK VEKNELRDEK QRLRAEKEKL ELQIKAVNAR 180 AAADIQHPPP TLSAAFTAQG QAAGNKLMPF IGYPGIAMWQ FLPPATVDTS QDHVLRPPVA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 67 | 73 | GRKRLKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 1e-59 | bHLH family protein |