PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512282.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 189aa    MW: 21483.3 Da    PI: 7.0755
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.76.4e-063391855
                    HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                      +++L +llP+     +   ls ++  e+A++YIksL+
  XP_023512282.1  3 LLYSKLNSLLPThH--SNELPLSVSDQIEEAIKYIKSLE 39
                    5799********66..46677****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MKLLYSKLNS LLPTHHSNEL PLSVSDQIEE AIKYIKSLEL KLKKDEEKKE RFTRRSSSSS  60
SYMAPTRTRN RNGPELRIKE MGSVVEVVLS TGLEDRFIFY EIIHIFYEER AEIVNVSYSV  120
VGNSVLYSLH AEIEDVVYEF GATKPTERIK RLVYGWENDA EMKAAGSSSS HGGIRRPGNG  180
PSTCSDNQF