PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023512174.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 189aa MW: 21130.3 Da PI: 5.3503

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023512174.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.5	4.2e-31	113	171	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgy+WrKYG+K+vk+s++pr+YY+C+s+gC+vkkkver++ed ++v++tYeg Hnhe XP_023512174.1 113 MDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDASYVITTYEGIHNHE 171 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MASFPYEDPN PNPNPNFMQF SPILDPASFF DFDLSNFLVG DDDSYVDQLA SSSSEKITGM 60 DSGGSSVAVD SGSSFVVSSE PSPSIRSKNG ERKRKGEMGC RVAFRTKSEQ EIMDDGYKWR 120 KYGKKSVKNS PNPRNYYKCS SEGCNVKKKV ERDREDASYV ITTYEGIHNH ESPFVVYYNQ 180 IPSLTSTST

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	92	128	RKRKGEMGCRVAFRTKSEQEIMDDGYKWRKYGKKSVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	2e-43	WRKY family protein