PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023512143.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 283aa MW: 30562.4 Da PI: 9.6996 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101.9 | 3.6e-32 | 212 | 269 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+++dp+++++tYeg+Hnh+ XP_023512143.1 212 DDYSWRKYGQKPIKGSPYPRGYYKCSSLrGCPARKHVERASDDPTMLIVTYEGDHNHS 269 99************************998****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MAVELLSACT NTQLSASMDQ DSAVQEAATG LHTLKNLITL LSHSHPSNLD SDCQAVANSA 60 VSHFKKAISL LGRSPRTGHA RFRRAPLDSS KIYNATPIQQ IPPPVERLES ATTINFSYSS 120 APNGSFLTSI PGADSGISLQ HEPSSSSFQI TDLSRASSGV KRKCGSENLG SGKCSVSSGG 180 RCHCSKKSRK MRLKRVVRVP AISSKNADIP PDDYSWRKYG QKPIKGSPYP RGYYKCSSLR 240 GCPARKHVER ASDDPTMLIV TYEGDHNHSQ SVAEASSLIL ESW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23320.1 | 2e-80 | WRKY family protein |