PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512143.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 283aa    MW: 30562.4 Da    PI: 9.6996
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512143.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.93.6e-32212269359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+++dp+++++tYeg+Hnh+
  XP_023512143.1 212 DDYSWRKYGQKPIKGSPYPRGYYKCSSLrGCPARKHVERASDDPTMLIVTYEGDHNHS 269
                     99************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MAVELLSACT NTQLSASMDQ DSAVQEAATG LHTLKNLITL LSHSHPSNLD SDCQAVANSA  60
VSHFKKAISL LGRSPRTGHA RFRRAPLDSS KIYNATPIQQ IPPPVERLES ATTINFSYSS  120
APNGSFLTSI PGADSGISLQ HEPSSSSFQI TDLSRASSGV KRKCGSENLG SGKCSVSSGG  180
RCHCSKKSRK MRLKRVVRVP AISSKNADIP PDDYSWRKYG QKPIKGSPYP RGYYKCSSLR  240
GCPARKHVER ASDDPTMLIV TYEGDHNHSQ SVAEASSLIL ESW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.12e-80WRKY family protein