PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512140.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 282aa    MW: 30475.3 Da    PI: 9.6996
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512140.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.93.6e-32211268359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+++dp+++++tYeg+Hnh+
  XP_023512140.1 211 DDYSWRKYGQKPIKGSPYPRGYYKCSSLrGCPARKHVERASDDPTMLIVTYEGDHNHS 268
                     99************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MAVELLSACT NTQLSASMDQ DSAVQEAATG LHTLKNLITL LSHSHPSNLD SDCQAVANSA  60
VSHFKKAISL LGRSPRTGHA RFRRAPLDSS KIYNATPIQQ IPPPVERLES ATTINFSYSS  120
APNGSFLTSI PGADSGISLQ HEPSSSSFQI TDLSRASSGV KRKCGSENLG SGKCSVSSGG  180
RCHCSKKRKM RLKRVVRVPA ISSKNADIPP DDYSWRKYGQ KPIKGSPYPR GYYKCSSLRG  240
CPARKHVERA SDDPTMLIVT YEGDHNHSQS VAEASSLILE SW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.11e-73WRKY family protein