PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512129.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family SAP
Protein Properties Length: 446aa    MW: 49261.5 Da    PI: 6.5063
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP697.71.4e-21224462454
             SAP   2 ssssssssseseegseggeggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqrl 96 
                     sss+ ssss s+ g        +++g+++gpsssr+ra+nevwpePf+ealatqvaidasrslGr+ aa al nvfqvcstwravsrs+llw+rl
  XP_023512129.1   2 SSSAPSSSS-SGGG-----RRRRGGGDFDGPSSSRRRATNEVWPEPFIEALATQVAIDASRSLGRIHAAAALSNVFQVCSTWRAVSRSELLWHRL 90 
                     333333222.2222.....223445799******************************************************************* PP

             SAP  97 trriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhr 191
                     t +iW rt++l dtWr+ey+y+h ta nfrt r+ +++lqfd++dvde   +d+l+Crcla+s ++la+GfadG+vrlfdl+tr+hv+tf+p+hr
  XP_023512129.1  91 TTQIWGRTDRLLDTWRDEYVYWHTTACNFRTHRSLHTVLQFDQSDVDE---PDSLMCRCLAISLRHLACGFADGTVRLFDLATRVHVTTFRPHHR 182
                     ********************************************9998...689***************************************** PP

             SAP 192 drlGrfsravsGivisdsrlvfatldGdihvavidgag..aaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGG 284
                     drlG+fsravsGivi+d+r+vfa++dGdih+ vid +    +++rr++ G+v+ndG+lvdfaG++rWwvGlyaGvpGrafhiWd+++eelvfvGG
  XP_023512129.1 183 DRLGQFSRAVSGIVIADARIVFASIDGDIHIGVIDRTPaaISPTRRVHEGNVMNDGVLVDFAGCDRWWVGLYAGVPGRAFHIWDGNSEELVFVGG 277
                     **********************************986433679**************************************************** PP

             SAP 285 sltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcr 379
                     sltdPe+v+GWhml+e +e vGrvrv++re+avaCtsl+l+v+dlrnq vvl+eee+    iv+s+d+sne+y+vvd +Gva vrrv+++eevc 
  XP_023512129.1 278 SLTDPESVTGWHMLAEPMEQVGRVRVSSRESAVACTSLQLMVLDLRNQ-VVLNEEENGVVWIVTSMDVSNETYIVVDGHGVAVVRRVDTMEEVCT 371
                     ***********************************************8.667778888999********************************** PP

             SAP 380 frvrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfga 454
                     f+v+g aqrg +gC+n gya++ +gg +rvWeie+ + yly +rer+g +na+va+dr+va+s  d+t+hl+dfga
  XP_023512129.1 372 FTVTGaAQRGAVGCMNMGYAVMSSGGAIRVWEIEHGQ-YLYRFRERIGAANAVVANDRYVAASGFDTTLHLWDFGA 446
                     *****9****************************966.************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    
MSSSAPSSSS SGGGRRRRGG GDFDGPSSSR RRATNEVWPE PFIEALATQV AIDASRSLGR  60
IHAAAALSNV FQVCSTWRAV SRSELLWHRL TTQIWGRTDR LLDTWRDEYV YWHTTACNFR  120
THRSLHTVLQ FDQSDVDEPD SLMCRCLAIS LRHLACGFAD GTVRLFDLAT RVHVTTFRPH  180
HRDRLGQFSR AVSGIVIADA RIVFASIDGD IHIGVIDRTP AAISPTRRVH EGNVMNDGVL  240
VDFAGCDRWW VGLYAGVPGR AFHIWDGNSE ELVFVGGSLT DPESVTGWHM LAEPMEQVGR  300
VRVSSRESAV ACTSLQLMVL DLRNQVVLNE EENGVVWIVT SMDVSNETYI VVDGHGVAVV  360
RRVDTMEEVC TFTVTGAAQR GAVGCMNMGY AVMSSGGAIR VWEIEHGQYL YRFRERIGAA  420
NAVVANDRYV AASGFDTTLH LWDFGA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11221GGGRRRRGGG
21322GGGRRRRGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-170SAP family protein