PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023512108.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 220aa MW: 25648.7 Da PI: 9.5906

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023512108.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101	6.9e-32	143	201	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ XP_023512108.1 143 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDHCRVKKRVERLAEDPRMVITTYEGRHVHS 201 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MGSKSQLLLN PQQALFEDQD HQTPPISQMG FFNFPSNPFE NPNFSTSNNN NNNSDTNLNL 60 SETLLFSSMN LPLKPSPFYE FAPPHLLSLQ TSTPNLWPWG EIGKRSNENQ LGISTMKMKK 120 IKGRRRVREP RFSFKTLSDV DVLDDGYKWR KYGQKVVKNT QHPRSYYRCT QDHCRVKKRV 180 ERLAEDPRMV ITTYEGRHVH SPSHDSEDSE AQTHLNNFFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	1e-59	WRKY family protein