PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023512019.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

C2H2

Protein Properties

Length: 157aa MW: 16999.4 Da PI: 8.0859

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023512019.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12	0.00062	34	56	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H +H XP_023512019.1 34 FVCKTCNREFSSFQALGGHRASH 56 89**********99999998887 PP
2	zf-C2H2	11.6	0.00088	78	100	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg F+ L H+r+H XP_023512019.1 78 HECSVCGLEFPLGQALGGHMRRH 100 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 157 aa Download sequence
MKRFRVQSQI DVMGVADCLI SNHANTAAFS GRVFVCKTCN REFSSFQALG GHRASHRKLK 60 PFLSGDGLHN NAIKTKAHEC SVCGLEFPLG QALGGHMRRH RNSSPLADCP PTTHPVSDES 120 DYDIGVGGIF GVDLNLTPLE NDLVRLQLMA PPVGCLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	3e-32	C2H2 family protein