PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511998.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 256aa    MW: 28659.7 Da    PI: 8.4782
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511998.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.86.3e-4041100261
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                     +e+al+cprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+ 
  XP_023511998.1  41 PEQALRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRP 100
                     7899*****************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MDHASGQHQE TQTQPQPLEN MLAISCPKVQ QENRKPMRPQ PEQALRCPRC DSTNTKFCYY  60
NNYSLSQPRY FCKSCRRYWT KGGTLRNVPV GGGCRKNKRP SPSTSRSSSP SSKRPHDQAA  120
NSSRLMLNDT HLPASLAFES TDLSLAFANL QHQSNRQQMG LFDSHNFQNL YSGEVENGGF  180
PNFENYNSSA VASTAMKQEM VGNGDQNMVL WGFPWQFNSN GDGNYMGDLD SGRDGWNFNG  240
NGIASSWHGL LNSPLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.18e-46Dof family protein