PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511991.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 317aa    MW: 34992 Da    PI: 10.0718
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511991.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.92.6e-3969128362
          zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                      +alkcprCdstntkfCy+nnyslsqPr+fCkaCrryWt+GGalrnvPvGgg rknkk++
  XP_023511991.1  69 PEALKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGFRKNKKKK 128
                     6789*****************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MAHSSLPIFL DPPNWQQPPS TNDNHQDPRQ LPAFLPPPPP PPPSTAAQGG GIRPGSMAYR  60
ARLAMLPQPE ALKCPRCDST NTKFCYFNNY SLSQPRHFCK ACRRYWTRGG ALRNVPVGGG  120
FRKNKKKKKS NPPKSPTASQ PEMGNSRPIM SRSCNIESSS TMSHFPPSFP SLHHHISRFG  180
AAANSSAVNF AGIHMNSGRE MEQWQRSQQQ QPFFVAGLEP PAATATAFPQ NFQTEGNNNN  240
NSFGGNHLSQ SGGLQYNCHQ QLQNVTPFSR IPMKNEEQGI LSNLLRQDQN GEFWGGDHQN  300
SWTDLSALSS SSSSHLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.13e-39Dof family protein