PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023511848.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 365aa MW: 40318.9 Da PI: 9.1443

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023511848.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.8	1.2e-33	33	87	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_023511848.1 33 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 87 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.4e-23	35	86	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_023511848.1 35 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 86 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MFHTTKKPSS MTPHDRPMCV QGDSGLVLTT DPKPRLRWTV ELHERFVDAV TQLGGPDKAT 60 PKTIMRVMGV KGLTLYHLKS HLQKFRLGKQ PHKEFNDQSI KDGMRASAME LQRNSGSSST 120 LMERSMNEMQ LEVQRRLHEQ IEVQRHLQLR IEAQGKYMQS ILEKACQTLA GENMAVASTA 180 AGPFKTTSNN MGTTSTNLVP DAAIKDFISP HPPHTFPPFQ DMNNLFTSEP PPPPPPLIDC 240 LKKPSPFISG AGKAPIFWPD DLRLQHLGTP SATLVPPPPS IGSPPDLDSL QLEMYESKPP 300 PLSPLLVGND AMNEKKFDAS VKLEKPSPRQ SSGHSDERVN NNNNGMPNNS NPTMSQPQGR 360 NSSFG

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MFHTTKKPSS MTPHDRPMCV QGDSGLVLTT DPKPRLRWTV ELHERFVDAV TQLGGPDKAT  60
PKTIMRVMGV KGLTLYHLKS HLQKFRLGKQ PHKEFNDQSI KDGMRASAME LQRNSGSSST  120
LMERSMNEMQ LEVQRRLHEQ IEVQRHLQLR IEAQGKYMQS ILEKACQTLA GENMAVASTA  180
AGPFKTTSNN MGTTSTNLVP DAAIKDFISP HPPHTFPPFQ DMNNLFTSEP PPPPPPLIDC  240
LKKPSPFISG AGKAPIFWPD DLRLQHLGTP SATLVPPPPS IGSPPDLDSL QLEMYESKPP  300
PLSPLLVGND AMNEKKFDAS VKLEKPSPRQ SSGHSDERVN NNNNGMPNNS NPTMSQPQGR  360
NSSFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-108	G2-like family protein