PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511813.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family G2-like
Protein Properties Length: 244aa    MW: 27049.5 Da    PI: 7.0703
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511813.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.31.7e-28105158155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +pr+ Wtp+LH+rFv++v++L G ++A Pk+i++lm+v+gLt+e+v+SHLQkYRl
  XP_023511813.1 105 RPRVAWTPQLHKRFVDVVSHL-GLKEAAPKAIMRLMNVEGLTRENVASHLQKYRL 158
                     59*******************.9*******************************8 PP
2Myb_DNA-binding47.44.5e-15107157148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r +WT+++++++vd+v  lG +   +k+I+r m+ +g+t++++ s++qky+
   XP_023511813.1 107 RVAWTPQLHKRFVDVVSHLGLKeaAPKAIMRLMNvEGLTRENVASHLQKYR 157
                      679***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MELASAFRIL MEPHRSISDV KSASKTTILN ICDGQSEGYR GFELNYDQTR GEDAAMIESD  60
EVINVDELGS DSRKLRRIDC FKEANSAPRG ESLIEDAALA RTLKRPRVAW TPQLHKRFVD  120
VVSHLGLKEA APKAIMRLMN VEGLTRENVA SHLQKYRLYL KRTQPSSTTD EATQNSHDSA  180
PSADSQGNGY FPSTFPMTYA PSPMMPMMFY SMGAHGHGLS HTGMPMVNLS TVPTHSCSTK  240
GQHD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.22e-42G2-like family protein