PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511812.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family G2-like
Protein Properties Length: 288aa    MW: 32000.9 Da    PI: 6.3483
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511812.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.92.3e-28149202155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +pr+ Wtp+LH+rFv++v++L G ++A Pk+i++lm+v+gLt+e+v+SHLQkYRl
  XP_023511812.1 149 RPRVAWTPQLHKRFVDVVSHL-GLKEAAPKAIMRLMNVEGLTRENVASHLQKYRL 202
                     59*******************.9*******************************8 PP
2Myb_DNA-binding475.9e-15151201148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r +WT+++++++vd+v  lG +   +k+I+r m+ +g+t++++ s++qky+
   XP_023511812.1 151 RVAWTPQLHKRFVDVVSHLGLKeaAPKAIMRLMNvEGLTRENVASHLQKYR 201
                      679***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MEKNRECRFG DGNGCINGDE RVFQWEDGLP DTEKLTPLSQ SLVSQELASA FRILMEPHRS  60
ISDVKSASKT TILNICDGQS EGYRGFELNY DQTRGEDAAM IESDEVINVD ELGSDSRKLR  120
RIDCFKEANS APRGESLIED AALARTLKRP RVAWTPQLHK RFVDVVSHLG LKEAAPKAIM  180
RLMNVEGLTR ENVASHLQKY RLYLKRTQPS STTDEATQNS HDSAPSADSQ GNGYFPSTFP  240
MTYAPSPMMP MMFYSMGAHG HGLSHTGMPM VNLSTVPTHS CSTKGQHD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.22e-51G2-like family protein