PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023511801.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

E2F/DP

Protein Properties

Length: 463aa MW: 51250.9 Da PI: 4.5065

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023511801.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	87	1.4e-27	140	205	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_023511801.1 140 RYDSSLGLLTKKFINLIKQAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 205 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MSGSRAPNSS GHLPEQIMHS LKRQLPFSSM KPPFASPGDY HRFAPDPRLA DQEADAIVVR 60 SPQLKRKSEV ADYEADSTDR AAGPRFSEVA NSPHQTPVSV KGGKGNKSRL TKCSRSGPQT 120 PMSNVGSPSA NNLTPAGPCR YDSSLGLLTK KFINLIKQAE DGILDLNKAA DTLEVQKRRI 180 YDITNVLEGI GLIEKKLKNR IQWKGLDVSR SGDVDDNYAG LQAEVENLSM EERGLDEQIR 240 EMQERLRDLS EDENNQRWLF VTEEDIKGLP CFQNETLIAI KAPHGTTLEV PDPDEAVDYP 300 QRRYRIVLRS TMGPIDVYLV SQFEEKFEEI NGVEVPPSLP SSSGFNEAPA TTIGTEDTRG 360 KEIETREQDV HRMCSDLNAS QDFVGGIMKI VPSVVDSDAD YWLLSDADVS ITDMWRTEPG 420 VEWNDLGTFH EDYSIANDST PETQNPLPSN APDMPSSANP SSS

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MSGSRAPNSS GHLPEQIMHS LKRQLPFSSM KPPFASPGDY HRFAPDPRLA DQEADAIVVR  60
SPQLKRKSEV ADYEADSTDR AAGPRFSEVA NSPHQTPVSV KGGKGNKSRL TKCSRSGPQT  120
PMSNVGSPSA NNLTPAGPCR YDSSLGLLTK KFINLIKQAE DGILDLNKAA DTLEVQKRRI  180
YDITNVLEGI GLIEKKLKNR IQWKGLDVSR SGDVDDNYAG LQAEVENLSM EERGLDEQIR  240
EMQERLRDLS EDENNQRWLF VTEEDIKGLP CFQNETLIAI KAPHGTTLEV PDPDEAVDYP  300
QRRYRIVLRS TMGPIDVYLV SQFEEKFEEI NGVEVPPSLP SSSGFNEAPA TTIGTEDTRG  360
KEIETREQDV HRMCSDLNAS QDFVGGIMKI VPSVVDSDAD YWLLSDADVS ITDMWRTEPG  420
VEWNDLGTFH EDYSIANDST PETQNPLPSN APDMPSSANP SSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-161	E2F/DP family protein