PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023511742.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SRS | ||||||||
Protein Properties | Length: 267aa MW: 30203.5 Da PI: 7.3385 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 173.7 | 9e-54 | 71 | 200 | 5 | 154 |
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskke 99 +++CqdCGnqakkdC+h RCRtCCksrgf+C+thvkstWvpa+krrerq q ++ +++ ++ +r+ q+a t XP_023511742.1 71 SINCQDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQ------SRLDRPD------QTAPVDT--------PG 145 579*********************************************88777654333......2222222......2222222........35 PP DUF702 100 letsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 le++++P+e +s+avfrcv+vs++dd ee++aYqt+v+igG +fkGiLydqG+e+ XP_023511742.1 146 LEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGRMFKGILYDQGPES 200 78889************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MTGLFYLSEK QEENQEQRGR EQQLFLSKGL EIWPQQNLEN YISFGVGPSR RNFMINASDR 60 HDQFVPRLGF SINCQDCGNQ AKKDCSHLRC RTCCKSRGFH CQTHVKSTWV PATKRRERQL 120 QRHQIVRQQS RLDRPDQTAP VDTPGLEVAN FPAEFNSSAV FRCVKVSAID DVEEQFAYQT 180 SVNIGGRMFK GILYDQGPES TPNLSTGGES SYCYGGEDDS QALELVIGAS NGEWRSNKST 240 PFMESSLYPI SINTFNSGTQ NFPSSRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51060.1 | 4e-58 | SRS family protein |