PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511742.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family SRS
Protein Properties Length: 267aa    MW: 30203.5 Da    PI: 7.3385
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511742.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702173.79e-54712005154
          DUF702   5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskke 99 
                     +++CqdCGnqakkdC+h RCRtCCksrgf+C+thvkstWvpa+krrerq q ++  +++      ++ +r+       q+a   t          
  XP_023511742.1  71 SINCQDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQ------SRLDRPD------QTAPVDT--------PG 145
                     579*********************************************88777654333......2222222......2222222........35 PP

          DUF702 100 letsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                     le++++P+e +s+avfrcv+vs++dd ee++aYqt+v+igG +fkGiLydqG+e+
  XP_023511742.1 146 LEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGRMFKGILYDQGPES 200
                     78889************************************************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MTGLFYLSEK QEENQEQRGR EQQLFLSKGL EIWPQQNLEN YISFGVGPSR RNFMINASDR  60
HDQFVPRLGF SINCQDCGNQ AKKDCSHLRC RTCCKSRGFH CQTHVKSTWV PATKRRERQL  120
QRHQIVRQQS RLDRPDQTAP VDTPGLEVAN FPAEFNSSAV FRCVKVSAID DVEEQFAYQT  180
SVNIGGRMFK GILYDQGPES TPNLSTGGES SYCYGGEDDS QALELVIGAS NGEWRSNKST  240
PFMESSLYPI SINTFNSGTQ NFPSSRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51060.14e-58SRS family protein