PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511697.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 289aa    MW: 31120.6 Da    PI: 5.2216
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511697.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.24.2e-17218253134
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C++Cgt++  Tp++Rrgp g++tLCnaCGl+++ kg
  XP_023511697.1 218 CTHCGTSSksTPMMRRGPAGPRTLCNACGLKWANKG 253
                     ********************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MPDSNFQDAM YGSAVVNNGG RVLDSIQNRV GDEGDDITVG EESMDNPQMR FEDSGGMNRV  60
QDIVPSSYVS GSDYNPLTGN GGADQLTLSF RGEVYAFDSV SPDKVQAVLL LLGGYEIPSG  120
IPAVGSVPVN QQGTNGFPVR SVQPQRAASL NRFREKRKER CFEKKIRYTV RKEVALRMQR  180
KKGQFISSKA NADEVGSSSL LSQTLDPGHD DGLLETSCTH CGTSSKSTPM MRRGPAGPRT  240
LCNACGLKWA NKGILRDLSK VSNTGVQELS VKDTEQSDGE ANESDAAVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-66GATA family protein