PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023511521.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 423aa MW: 47828.1 Da PI: 5.1469

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023511521.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.3	3.6e-33	227	280	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 r+rWtpeLH++Fveav++LGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+ XP_023511521.1 227 LRMRWTPELHDAFVEAVNKLGGSERATPKGVLKLMQVEGLTIYHVKSHLQKYRT 280 69***************************************************8 PP
2	Myb_DNA-binding	55.9	9.8e-18	228	279	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +v+av++lGg t+k + + m+ +g+t +++ks++qky+ XP_023511521.1 228 RMRWTPELHDAFVEAVNKLGGSeraTPKGVLKLMQvEGLTIYHVKSHLQKYR 279 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MSFNYLNKLR QDIKSVLPNC LEEVYPKLPD SRQVSMEREL VSRRFVHSSH LHSSSGVVGH 60 IFSSSPGFST DLHYSSVSFY ENQSDVPFVT EPSANGVLLN SHSELLSSTN HPTGENGNSW 120 RSDALPGFRE APESNPVGGS RVENNSCSSL MVSEDFSKEN DWQEWTDRLI TDDPLSSNWS 180 DLLVDADVVD LEPKMVHQAP NPAIQMQVQQ SRVQNRLPSS NGAPSKLRMR WTPELHDAFV 240 EAVNKLGGSE RATPKGVLKL MQVEGLTIYH VKSHLQKYRT ARYQPESSKG PMEKSTTSLE 300 DISSLDLKTS VDITEALRLQ MEVQKKLHEQ LEIQRNLQLR IEEQGKYLQM MFEEQCKSSN 360 NLTKPSDNPT RCTDPSEADS ISEKTTNQVE EKLLASHREV PENPEPDVFE SRSELSKRQR 420 TDE

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MSFNYLNKLR QDIKSVLPNC LEEVYPKLPD SRQVSMEREL VSRRFVHSSH LHSSSGVVGH  60
IFSSSPGFST DLHYSSVSFY ENQSDVPFVT EPSANGVLLN SHSELLSSTN HPTGENGNSW  120
RSDALPGFRE APESNPVGGS RVENNSCSSL MVSEDFSKEN DWQEWTDRLI TDDPLSSNWS  180
DLLVDADVVD LEPKMVHQAP NPAIQMQVQQ SRVQNRLPSS NGAPSKLRMR WTPELHDAFV  240
EAVNKLGGSE RATPKGVLKL MQVEGLTIYH VKSHLQKYRT ARYQPESSKG PMEKSTTSLE  300
DISSLDLKTS VDITEALRLQ MEVQKKLHEQ LEIQRNLQLR IEEQGKYLQM MFEEQCKSSN  360
NLTKPSDNPT RCTDPSEADS ISEKTTNQVE EKLLASHREV PENPEPDVFE SRSELSKRQR  420
TDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	4e-88	G2-like family protein