PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022964984.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 196aa    MW: 21445.4 Da    PI: 7.0024
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022964984.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601383.3e-43361351100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++kll++lpe++r da+sslvyeA ar+rdPvyG++g i++lq+q+++l+aela
  XP_022964984.1  36 PCAACKTLRRRCTEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQKQINELQAELA 130
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022964984.1 131 KTQAE 135
                     *9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MDAKSSPTST IFRSQSPSSS PLPPPQSVQA GLVASPCAAC KTLRRRCTEK CVLAPYFPPS  60
DPLKFTIAHR IFGASNIIKL LQDLPESQRI DAVSSLVYEA SARIRDPVYG CAGAISQLQK  120
QINELQAELA KTQAELLNIH SHQTNLVALI CKELAQTPPP VSPLDHHTLD NNLNTATPQS  180
YTNLFEDSSI WEPLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.18e-68LBD family protein