PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022964945.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 464aa MW: 51849.9 Da PI: 8.6523

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022964945.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.1	8.2e-08	342	390	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +l+++v ++G g+W+ I r +Rt ++k++w+++l XP_022964945.1 342 SWTLSEVMKLIEGVSEYGVGRWTEIKRLQFsssSHRTSVDLKDKWRNLL 390 5**********************876558999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MSFRIVLDFN TFHSHKCLGI EHFSFAVDFD HIKIDSESLH SSLTLEGERT KQEDHDGKLH 60 GADDVCSGSN KLLGTANSRT TDDIFNLAPG SSNASFLGNV DFGSYSQGFC TTDIGVDLSF 120 TGGHNVAFDQ KESKLMISSS TGSSGCSGSA TACLDDENMS DNRPVKRKRL SSCSSSKTNS 180 EHNESRIVLF NEGNRGDTLV TEKRLRKPPR RYSEESVEQK SRSNSKKSAP RASKDKSRPS 240 ESHKHQWQKK LKAAPVVYKD KSFNGGCIQV PFGLPIEESH SAKKIICWEP EEIKENRILC 300 IKDKNDVESF SAESEDENTE DECATKVYNA QKGNSRRKHH ISWTLSEVMK LIEGVSEYGV 360 GRWTEIKRLQ FSSSSHRTSV DLKDKWRNLL KASDTQLQNR RKVVVGRKQT SQQVPESVLC 420 RVRELAAIYP YPRENKSKNL CSAPSSSSFK STANNMLISL PTVM

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MSFRIVLDFN TFHSHKCLGI EHFSFAVDFD HIKIDSESLH SSLTLEGERT KQEDHDGKLH  60
GADDVCSGSN KLLGTANSRT TDDIFNLAPG SSNASFLGNV DFGSYSQGFC TTDIGVDLSF  120
TGGHNVAFDQ KESKLMISSS TGSSGCSGSA TACLDDENMS DNRPVKRKRL SSCSSSKTNS  180
EHNESRIVLF NEGNRGDTLV TEKRLRKPPR RYSEESVEQK SRSNSKKSAP RASKDKSRPS  240
ESHKHQWQKK LKAAPVVYKD KSFNGGCIQV PFGLPIEESH SAKKIICWEP EEIKENRILC  300
IKDKNDVESF SAESEDENTE DECATKVYNA QKGNSRRKHH ISWTLSEVMK LIEGVSEYGV  360
GRWTEIKRLQ FSSSSHRTSV DLKDKWRNLL KASDTQLQNR RKVVVGRKQT SQQVPESVLC  420
RVRELAAIYP YPRENKSKNL CSAPSSSSFK STANNMLISL PTVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	3e-31	MYB_related family protein