PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022964877.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 411aa MW: 45686.9 Da PI: 9.9371 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.6 | 4.5e-05 | 64 | 86 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_022964877.1 64 FICEICKKGFQRDQNLQLHRRGH 86 89*******************88 PP | |||||||
2 | zf-C2H2 | 12.2 | 0.00055 | 140 | 162 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + XP_022964877.1 140 WKCEKCSKKYAVQSDWKAHSKIC 162 58*****************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 411 aa Download sequence |
MMSEFDALSG LSTISNLIGQ HHPNPNPNPV LVPLKKKRNL PGTPDPDAEV IAMSPKSLMA 60 KNRFICEICK KGFQRDQNLQ LHRRGHNLPW KLRQRTSNEV RKKVYVCPEK SCVHHDPSRA 120 LGDLTGIKKH YSRKHGEKKW KCEKCSKKYA VQSDWKAHSK ICGTKEYKCD CGTLFSRKDS 180 FITHRAFCDA LAEENSRIST VSTLNHHPTF INNFSPSPSS SSLIFRPNFP TTTVNHSNVI 240 SDHGGDDHKP RQLPLSPPPP PQLPLWLDPP QNPNPFFSTA FSDHPPLFLP ENQQSFFSEP 300 LTTTSSYPPP PHMSATALLQ KASQMGPSRT PPTPPILFNN TTAVTAYGMN NSAAPTAVLS 360 DGRPMMKPIM GGAKEEIGGQ NLTRDFLGVG NQVVHLTPAG SNQYSDQSRR H |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 91 | 103 | KLRQRTSNEVRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50700.1 | 2e-97 | C2H2 family protein |