PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022964611.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 445aa MW: 48316.6 Da PI: 9.1429

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022964611.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.2e-05	68	90	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022964611.1 68 FVCEICNKGFQRDQNLQLHRRGH 90 89*******************88 PP
2	zf-C2H2	11.4	0.00098	145	167	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_022964611.1 145 WKCDKCSKKYAVQSDWKAHSKIC 167 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MMKGSFLSQQ QQLLMDQTLS NLTSPSSPNN PTQFFSPPPP KRKRNLAGNP DAEVIALSPK 60 TLIATNRFVC EICNKGFQRD QNLQLHRRGH NLPWKLKQRS NKEVIKKKVY VCPEPSCVHH 120 DPSRALGDLT GIKKHFCRKH GEKKWKCDKC SKKYAVQSDW KAHSKICGTK EYKCDCGTLF 180 SRRDSFITHR AFCDALADES ARSAMALSPL ISNYNNSQEL LFKRGFGGGD SSNNDDNNLK 240 TEIPSWLQSD EIFVGSTQQT LNPNPSGLVS PCVSSPHISA TALLQKAAQM GATMSSGSMG 300 RTHEVVHVST GNYGEMGIRS REGGMGVSCS SSSCCTDYGN KAAAVSAAVL ATATPSGPTT 360 FLHDMINSLA SASHPFHQDS SAFNAAAFAA MHHHTAAGRS DGLTRDFLGL RPLSHGDILS 420 ITGFGNCIVP NSATLQSQTQ KPWQG

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MMKGSFLSQQ QQLLMDQTLS NLTSPSSPNN PTQFFSPPPP KRKRNLAGNP DAEVIALSPK  60
TLIATNRFVC EICNKGFQRD QNLQLHRRGH NLPWKLKQRS NKEVIKKKVY VCPEPSCVHH  120
DPSRALGDLT GIKKHFCRKH GEKKWKCDKC SKKYAVQSDW KAHSKICGTK EYKCDCGTLF  180
SRRDSFITHR AFCDALADES ARSAMALSPL ISNYNNSQEL LFKRGFGGGD SSNNDDNNLK  240
TEIPSWLQSD EIFVGSTQQT LNPNPSGLVS PCVSSPHISA TALLQKAAQM GATMSSGSMG  300
RTHEVVHVST GNYGEMGIRS REGGMGVSCS SSSCCTDYGN KAAAVSAAVL ATATPSGPTT  360
FLHDMINSLA SASHPFHQDS SAFNAAAFAA MHHHTAAGRS DGLTRDFLGL RPLSHGDILS  420
ITGFGNCIVP NSATLQSQTQ KPWQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	1e-104	C2H2 family protein