PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022964040.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 388aa    MW: 42985.3 Da    PI: 4.9217
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022964040.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.6e-19114163255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp     +  r++lg+f taeeAa+a++a +++++g
  XP_022964040.1 114 QYRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFNTAEEAARAYDAEARRIRG 163
                     69*******.**********94....35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MCGGALISGF IPTTRSRRVT GEHLWPNLNK PGFGNQLSKP VKSSIVDIDD DFEADFQHFK  60
DESDLELDDG ELVDVKPFAF SAGRNPSVPS ARASKSVEFS GQAEKSAKRK RKNQYRGIRQ  120
RPWGKWAAEI RDPQKGVRVW LGTFNTAEEA ARAYDAEARR IRGKKAKVNF PNEAPQTSGT  180
RSGKTNHQGP LAKTSLTRTQ PNLIQNNDSV NSSDEEYYRT MGFLEEKPLA NQLVNMNSFH  240
ANGDVAIKTS PPSSDVSPMY FYSDQGSNSF DYSDFGWGEQ GAKTPEISST LSAAMENQES  300
YFVESASPRK KVKYSSENMV PQGSEKTLSE ELSSFESEMK NFQMPYLDGG WDTSMDAFLA  360
GETGNQDGEN SVDLWTSDDL TAMIGSVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.32e-81ERF family protein