PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022963761.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 336aa MW: 36839.5 Da PI: 7.7265 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 25.1 | 3.2e-08 | 75 | 99 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +kt+lC+ f++ GtC+y +C+FaH+ XP_022963761.1 75 FKTKLCCKFRA-GTCPYITNCNFAHS 99 69*********.*************8 PP | |||||||
2 | zf-CCCH | 18.7 | 3e-06 | 149 | 174 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 yk + C+ f+ C+yGd+C+F H+ XP_022963761.1 149 YKGRHCKKFYTEEGCPYGDSCTFLHD 174 78888********************7 PP | |||||||
3 | zf-CCCH | 42.4 | 1.2e-13 | 217 | 242 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +kt++C+ + tG+C++G++C+FaHg XP_022963761.1 217 WKTRICNKWELTGYCPFGSKCHFAHG 242 8************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MSSENWPGEV WATEEEYRAW NNGGGDGSID TPSNSSYDQR QSQSRSGSEP PNKKSRSSQD 60 VTSSNRSKAI GKMFFKTKLC CKFRAGTCPY ITNCNFAHSI EELRRPPHNW QQEIVAAHEE 120 EKVFSEPREE FQIPSLGTSN FGSESQRSYK GRHCKKFYTE EGCPYGDSCT FLHDEQSKNR 180 ESVAISLGPG GYSGGGGGGG GGGGGSGNGS NSKPSNWKTR ICNKWELTGY CPFGSKCHFA 240 HGAAELHRYG GGLMETETRD SSSAPPDLKQ GVLPKAPGDT LVASVPSLPH SDVYHIVVPS 300 QRSTIVIQRS GQRTHQKWKG PDKISRIYGD WIDDIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32360.1 | 1e-124 | C3H family protein |