PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022963630.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 1088aa MW: 121251 Da PI: 5.987

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022963630.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	182.5	4.8e-57	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ k+rwl++ ei++iL n+ k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktvrE+hekLKvg+++vl+cyYah+een++fqr XP_022963630.1 20 IEAKHRWLRPAEICEILRNYPKFQIASEPPDRPSSGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVREAHEKLKVGSIDVLHCYYAHGEENENFQR 114 4569***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l +iv+vhylevk XP_022963630.1 115 RSYWMLEEHLMHIVFVHYLEVK 136 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1088 aa Download sequence
MADRGSYGLA PRLDIDQLLI EAKHRWLRPA EICEILRNYP KFQIASEPPD RPSSGSLFLF 60 DRKVLRYFRK DGHKWRKKKD GKTVREAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML 120 EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP TSASYSSSYN QAASENADSP 180 SPTSPLTPFC EDCDTDTGQA TSRFRSFPTS PKMGNGLLMN KQDAGQSNFY FPHSSSNTSV 240 PAVDYVSQVQ KDVLGGNICG TNVTDSQKTL SSASWEEILQ HCTTGFQAVP SHVLSSLIEP 300 VSSGIVVGQE NSIPGKPSTS NSAITEDFGS SLTMNPNWQV SFEDNTSSFS KEYVDQFPEL 360 YSVYDIDSRL TEQKSHNATF GSGHEMSCAH PGIENEEILP NNLELQFKEG ESYSAMRLSS 420 ENDTSKEGTV GYSLSLKQSL IDGEESLKKV DSFSRWVSRE LVEVDDLHMH PSSGLSWSTV 480 ECGDMVDNSS LSPSLSEDQL FSIIEFSPKW TLADLETEVV IIGKFLGNNH GTKCYWSCMF 540 GEVEVPAEVL ADGILCCHAP PHSVGQVPFY VTCSNRLACS EIREFDYLAG SAQDVDVTEV 600 YTAGATEELY LHMRLERLLS HRSSNPPNNL SEGALEKRNL IRELISIKEE EDCYGEEPNS 660 LNVQIQHQNK EFLFVKLMKE KVYSWLIRKV IEGGKGPHIL DDEGQGLIHL AAALGYDWAI 720 RPIVAAGVSI NFRDINGWTA LHWAAFCGRE LTVGTLITLN AAPGLLADPS PENPLGIPPS 780 ELASMNGHKG IAGFLAESSL TSYIESISMG ETVKDGVLDV SKRKPVHTVS ERRATPISDG 840 FMPADLSLKD SLTAVCNATQ AAGRIHLMFR MQSFQRKKLS ECSPDELGSS DDTAISFAKA 900 RARKSGLSNS PAHAAAVHIQ KKFRGWRMRK EFLLIRQRIV KIQAHVRGHQ VRKQYKKIVW 960 SVGILDKIIL RWRRKGSGLR GFRSDAAAKN PSAVLEPPKE DDYDFLAKGR RQTEERFQKA 1020 LTRVKSMAQY PEGRDQYRRL LTVVQKCQET KASNMAITST REEIIEGDDM IDIDSLLDDD 1080 ALMSMTFD

Sequence ? help Back to Top

Protein Sequence Length: 1088 aa Download sequence

MADRGSYGLA PRLDIDQLLI EAKHRWLRPA EICEILRNYP KFQIASEPPD RPSSGSLFLF  60
DRKVLRYFRK DGHKWRKKKD GKTVREAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML  120
EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP TSASYSSSYN QAASENADSP  180
SPTSPLTPFC EDCDTDTGQA TSRFRSFPTS PKMGNGLLMN KQDAGQSNFY FPHSSSNTSV  240
PAVDYVSQVQ KDVLGGNICG TNVTDSQKTL SSASWEEILQ HCTTGFQAVP SHVLSSLIEP  300
VSSGIVVGQE NSIPGKPSTS NSAITEDFGS SLTMNPNWQV SFEDNTSSFS KEYVDQFPEL  360
YSVYDIDSRL TEQKSHNATF GSGHEMSCAH PGIENEEILP NNLELQFKEG ESYSAMRLSS  420
ENDTSKEGTV GYSLSLKQSL IDGEESLKKV DSFSRWVSRE LVEVDDLHMH PSSGLSWSTV  480
ECGDMVDNSS LSPSLSEDQL FSIIEFSPKW TLADLETEVV IIGKFLGNNH GTKCYWSCMF  540
GEVEVPAEVL ADGILCCHAP PHSVGQVPFY VTCSNRLACS EIREFDYLAG SAQDVDVTEV  600
YTAGATEELY LHMRLERLLS HRSSNPPNNL SEGALEKRNL IRELISIKEE EDCYGEEPNS  660
LNVQIQHQNK EFLFVKLMKE KVYSWLIRKV IEGGKGPHIL DDEGQGLIHL AAALGYDWAI  720
RPIVAAGVSI NFRDINGWTA LHWAAFCGRE LTVGTLITLN AAPGLLADPS PENPLGIPPS  780
ELASMNGHKG IAGFLAESSL TSYIESISMG ETVKDGVLDV SKRKPVHTVS ERRATPISDG  840
FMPADLSLKD SLTAVCNATQ AAGRIHLMFR MQSFQRKKLS ECSPDELGSS DDTAISFAKA  900
RARKSGLSNS PAHAAAVHIQ KKFRGWRMRK EFLLIRQRIV KIQAHVRGHQ VRKQYKKIVW  960
SVGILDKIIL RWRRKGSGLR GFRSDAAAKN PSAVLEPPKE DDYDFLAKGR RQTEERFQKA  1020
LTRVKSMAQY PEGRDQYRRL LTVVQKCQET KASNMAITST REEIIEGDDM IDIDSLLDDD  1080
ALMSMTFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein