PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963336.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 484aa    MW: 52875.2 Da    PI: 9.2914
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963336.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.63.4e-06439461426
                     ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                     ++C +f     C+ G+ C+F H+
  XP_022963336.1 439 KNCIYFNTPKGCRNGNDCQFKHD 461
                     68********************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    
MKRTRKSKGV SWANGVNLCQ VKLFSSEDCP SKVGQSSNHL QAKTSRRLPP YTYESNGCPP  60
GFNVTRLKNQ LADVSSIPLI KWNCPPKFAM SCHWCVAAGE ESKELESQNF REMRLLEAVY  120
PRASDIPPGA TVSTEIKNER YNDSVTPLVP IIPIEEEECE VMEADSAAVS NSATKSFRMM  180
SSNIQLEPAV SKRSIETSAA AAASGEMHTE KLPDVGVDVA AAASAALAVL MKSMEQGSMI  240
DTNLLIKIFN DTTMIQNLTN ILPLYEAAYG SPPSAAIAAP ISLSKPVTAS NSLPVPKSDT  300
IQKLPNQSLP HGSVGVPSSV TSLPQVSNIV ASGVKPASMP VRGRTEPQTV KTTIPNARNY  360
SNTGAAPGQV NMAPVSLVRT EVQQLKDLNY YKNLVRQHGE QKKDGKEQKF ELNGNNHNQQ  420
YPNMVHEMKA GNLKAKNKKN CIYFNTPKGC RNGNDCQFKH DMSNPWRINN VLETQSSKRM  480
KLWG