PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022963336.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 484aa MW: 52875.2 Da PI: 9.2914 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 18.6 | 3.4e-06 | 439 | 461 | 4 | 26 |
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 ++C +f C+ G+ C+F H+ XP_022963336.1 439 KNCIYFNTPKGCRNGNDCQFKHD 461 68********************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 484 aa Download sequence |
MKRTRKSKGV SWANGVNLCQ VKLFSSEDCP SKVGQSSNHL QAKTSRRLPP YTYESNGCPP 60 GFNVTRLKNQ LADVSSIPLI KWNCPPKFAM SCHWCVAAGE ESKELESQNF REMRLLEAVY 120 PRASDIPPGA TVSTEIKNER YNDSVTPLVP IIPIEEEECE VMEADSAAVS NSATKSFRMM 180 SSNIQLEPAV SKRSIETSAA AAASGEMHTE KLPDVGVDVA AAASAALAVL MKSMEQGSMI 240 DTNLLIKIFN DTTMIQNLTN ILPLYEAAYG SPPSAAIAAP ISLSKPVTAS NSLPVPKSDT 300 IQKLPNQSLP HGSVGVPSSV TSLPQVSNIV ASGVKPASMP VRGRTEPQTV KTTIPNARNY 360 SNTGAAPGQV NMAPVSLVRT EVQQLKDLNY YKNLVRQHGE QKKDGKEQKF ELNGNNHNQQ 420 YPNMVHEMKA GNLKAKNKKN CIYFNTPKGC RNGNDCQFKH DMSNPWRINN VLETQSSKRM 480 KLWG |