PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022963167.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 330aa MW: 36987.6 Da PI: 6.0206

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022963167.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.4	4.6e-12	150	196	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ ++f L l+P + K +Ka+iL Av+Y+k+Lq XP_022963167.1 150 EHVLAERKRREKLSQRFIALSALIPGL-----NKIDKASILSGAVRYVKELQ 196 5999********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MEISSTKWVS EWEMEDAPYF MDEFQVNPFE FSFDEMKFEE NGRSDFYGST DLPSAVKVEG 60 KGATSQGFAP KADSSSSSSH IISFEKLNCK AGKGCDVKGS VEPKIEMAYE SDRNLNFSTL 120 ITESWNNEYS RQGAKKAAGS VNRNPFHARE HVLAERKRRE KLSQRFIALS ALIPGLNKID 180 KASILSGAVR YVKELQERLK VVEEQAAISK VSEEQSTVYV KRRSPASSSD DDDTISSEEN 240 SFSGRPVPEI EARVSNKDVL FRIHCHKRKG CLSYLLGKIE NLNLTILNSS ALPFAHSKLD 300 ITIVAQVDDG FCMKVEDVVK NLRQALLDFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	155	160	ERKRRE
2	156	161	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	5e-50	bHLH family protein