PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022962758.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 428aa MW: 46654.7 Da PI: 7.1667 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 17.4 | 8e-06 | 386 | 407 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 C++f C+ G +C+F H+ XP_022962758.1 386 QCSYFDTPKGCRNGVNCQFKHD 407 5********************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 428 aa Download sequence |
MLHPYTAEFK DCPPGFEVTP SGTQLANLSS ISLIKWRCPL KFVMDCNWCV TAGEESIEVE 60 SQKLREMRFL EVVYPRVSAI PSGASVSTDI EDELYDDSFT PLVPIIPIEE DECEELEPDS 120 AAVGNLCTSS MPVTASNIQL EPAIHVCTID TSAGEKPTEK LPDVGMDVAA VASTALTVLM 180 KSMEQGSVIN TNLLIKIFSD PKMIQNLANI PPVSAAVSGS TPLATAAPIS LSKPVTKPVS 240 FPKSDLIPKL PNGSLLKVPN GFPSKVATVL PQMSIIPTSD VNLAPVPSHM PVPDPDKVKI 300 MIPNFKNYSK IGAIPAQANV APVSSVRNGQ QCKDLNYCKN LVRQHGNQRN NKEQKPGQDG 360 NNHHHRILKR VHEMNAENFR PKIVKQCSYF DTPKGCRNGV NCQFKHDVTF KNQNAKRMKV 420 CGEVTGMT |