PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962757.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 428aa    MW: 46654.7 Da    PI: 7.1667
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962757.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.48e-06386407526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f     C+ G +C+F H+
  XP_022962757.1 386 QCSYFDTPKGCRNGVNCQFKHD 407
                     5********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    
MLHPYTAEFK DCPPGFEVTP SGTQLANLSS ISLIKWRCPL KFVMDCNWCV TAGEESIEVE  60
SQKLREMRFL EVVYPRVSAI PSGASVSTDI EDELYDDSFT PLVPIIPIEE DECEELEPDS  120
AAVGNLCTSS MPVTASNIQL EPAIHVCTID TSAGEKPTEK LPDVGMDVAA VASTALTVLM  180
KSMEQGSVIN TNLLIKIFSD PKMIQNLANI PPVSAAVSGS TPLATAAPIS LSKPVTKPVS  240
FPKSDLIPKL PNGSLLKVPN GFPSKVATVL PQMSIIPTSD VNLAPVPSHM PVPDPDKVKI  300
MIPNFKNYSK IGAIPAQANV APVSSVRNGQ QCKDLNYCKN LVRQHGNQRN NKEQKPGQDG  360
NNHHHRILKR VHEMNAENFR PKIVKQCSYF DTPKGCRNGV NCQFKHDVTF KNQNAKRMKV  420
CGEVTGMT