PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022962756.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 468aa MW: 51099.8 Da PI: 7.7648 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 17.2 | 8.9e-06 | 426 | 447 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 C++f C+ G +C+F H+ XP_022962756.1 426 QCSYFDTPKGCRNGVNCQFKHD 447 5********************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 468 aa Download sequence |
MKRPRKSKGV SWTHGVDLCQ DCPSKAGLKS SDYLEAETPR MLHPYTAEFK DCPPGFEVTP 60 SGTQLANLSS ISLIKWRCPL KFVMDCNWCV TAGEESIEVE SQKLREMRFL EVVYPRVSAI 120 PSGASVSTDI EDELYDDSFT PLVPIIPIEE DECEELEPDS AAVGNLCTSS MPVTASNIQL 180 EPAIHVCTID TSAGEKPTEK LPDVGMDVAA VASTALTVLM KSMEQGSVIN TNLLIKIFSD 240 PKMIQNLANI PPVSAAVSGS TPLATAAPIS LSKPVTKPVS FPKSDLIPKL PNGSLLKVPN 300 GFPSKVATVL PQMSIIPTSD VNLAPVPSHM PVPDPDKVKI MIPNFKNYSK IGAIPAQANV 360 APVSSVRNGQ QCKDLNYCKN LVRQHGNQRN NKEQKPGQDG NNHHHRILKR VHEMNAENFR 420 PKIVKQCSYF DTPKGCRNGV NCQFKHDVTF KNQNAKRMKV CGEVTGMT |