PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962756.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 468aa    MW: 51099.8 Da    PI: 7.7648
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962756.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.28.9e-06426447526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f     C+ G +C+F H+
  XP_022962756.1 426 QCSYFDTPKGCRNGVNCQFKHD 447
                     5********************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    
MKRPRKSKGV SWTHGVDLCQ DCPSKAGLKS SDYLEAETPR MLHPYTAEFK DCPPGFEVTP  60
SGTQLANLSS ISLIKWRCPL KFVMDCNWCV TAGEESIEVE SQKLREMRFL EVVYPRVSAI  120
PSGASVSTDI EDELYDDSFT PLVPIIPIEE DECEELEPDS AAVGNLCTSS MPVTASNIQL  180
EPAIHVCTID TSAGEKPTEK LPDVGMDVAA VASTALTVLM KSMEQGSVIN TNLLIKIFSD  240
PKMIQNLANI PPVSAAVSGS TPLATAAPIS LSKPVTKPVS FPKSDLIPKL PNGSLLKVPN  300
GFPSKVATVL PQMSIIPTSD VNLAPVPSHM PVPDPDKVKI MIPNFKNYSK IGAIPAQANV  360
APVSSVRNGQ QCKDLNYCKN LVRQHGNQRN NKEQKPGQDG NNHHHRILKR VHEMNAENFR  420
PKIVKQCSYF DTPKGCRNGV NCQFKHDVTF KNQNAKRMKV CGEVTGMT