PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962755.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 475aa    MW: 51889.7 Da    PI: 7.9173
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962755.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.29e-06433454526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f     C+ G +C+F H+
  XP_022962755.1 433 QCSYFDTPKGCRNGVNCQFKHD 454
                     5********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
MKRPRKSKGV SWTHGVDLCQ VKLFSSQDCP SKAGLKSSDY LEAETPRMLH PYTAEFKDCP  60
PGFEVTPSGT QLANLSSISL IKWRCPLKFV MDCNWCVTAG EESIEVESQK LREMRFLEVV  120
YPRVSAIPSG ASVSTDIEDE LYDDSFTPLV PIIPIEEDEC EELEPDSAAV GNLCTSSMPV  180
TASNIQLEPA IHVCTIDTSA GEKPTEKLPD VGMDVAAVAS TALTVLMKSM EQGSVINTNL  240
LIKIFSDPKM IQNLANIPPV SAAVSGSTPL ATAAPISLSK PVTKPVSFPK SDLIPKLPNG  300
SLLKVPNGFP SKVATVLPQM SIIPTSDVNL APVPSHMPVP DPDKVKIMIP NFKNYSKIGA  360
IPAQANVAPV SSVRNGQQCK DLNYCKNLVR QHGNQRNNKE QKPGQDGNNH HHRILKRVHE  420
MNAENFRPKI VKQCSYFDTP KGCRNGVNCQ FKHDVTFKNQ NAKRMKVCGE VTGMT