PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022962752.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 379aa MW: 41625.1 Da PI: 10.2589

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022962752.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.2e-05	53	75	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_022962752.1 53 FICEICNKGFQRDQNLQLHRRGH 75 89*******************88 PP
2	zf-C2H2	13.2	0.00026	129	151	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_022962752.1 129 WKCEKCSKKYAVQSDWKAHSKTC 151 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MSEQSSQLYH LPHNPNPNPN PNPKKKRNFP GKPDPDAEVI ALSPNALMAT NRFICEICNK 60 GFQRDQNLQL HRRGHNLPWK LRQRSNKEVK KKVYICPEKS CVHHDPARAL GDLTGIKKHF 120 SRKHGEKKWK CEKCSKKYAV QSDWKAHSKT CGTREYKCDC GTLFSRKDSF ITHRAFCDAL 180 ADESRLISSV AANSTPNFIA NSLNESLFNS QGGIFVQSDH NNFPINNTFP FPQIPPSNLF 240 QISNRILGLN KNSSKTAVNL SSFCSSGSVG GGKLIMPMSA TALLLKAAHF GSTKSNPSYS 300 GNSVGVMSSS SSSFDQSKGE LQRIGSHGGS GSGLRDFLGT REREGSGNME LVSLMEMSKF 360 GSSMSSEMGL SKFIGNARG

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MSEQSSQLYH LPHNPNPNPN PNPKKKRNFP GKPDPDAEVI ALSPNALMAT NRFICEICNK  60
GFQRDQNLQL HRRGHNLPWK LRQRSNKEVK KKVYICPEKS CVHHDPARAL GDLTGIKKHF  120
SRKHGEKKWK CEKCSKKYAV QSDWKAHSKT CGTREYKCDC GTLFSRKDSF ITHRAFCDAL  180
ADESRLISSV AANSTPNFIA NSLNESLFNS QGGIFVQSDH NNFPINNTFP FPQIPPSNLF  240
QISNRILGLN KNSSKTAVNL SSFCSSGSVG GGKLIMPMSA TALLLKAAHF GSTKSNPSYS  300
GNSVGVMSSS SSSFDQSKGE LQRIGSHGGS GSGLRDFLGT REREGSGNME LVSLMEMSKF  360
GSSMSSEMGL SKFIGNARG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	1e-94	C2H2 family protein