PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962702.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 859aa    MW: 95581.6 Da    PI: 8.7244
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962702.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.73.7e-07280299525
                     --SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaH 25 
                     +C+ffa+ GtC+ G +Ck++H
  XP_022962702.1 280 ICNFFAA-GTCRNGKNCKYSH 299
                     8**9999.************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 859 aa     Download sequence    
MSGSGRKRSS KWDLREESRP GWISPELASD DGSKRSGMET TNTVSKSKKD WGLLSKEPLS  60
ETRDSHKEDY TNKGYNKNME GTAEWDADKS YSTRMSPGLD GWRRHSSNPS DRNDWSRGRS  120
RSRSWSRSRS RSRTPPRSFK RDSGFHDRNR NRTRVSTQLC RDFASGRCRR GGGCPFLHAE  180
NQNLDDSWES RNKKGGRSLR STPHDFRDYS RSGRSAAPCT DFVKGRCHRG ESCKYPHDSG  240
FHELSRGSSN DISRDRENDR SKEAYLSRGE REPSSSSLVI CNFFAAGTCR NGKNCKYSHQ  300
SQPCASLERK SSADRWEQVE CSDGRERLWD GSKSNELASG SDFTQLREEK NKQIASQESR  360
YTWPSELKGG HSLNNESKIQ WDQAASIKTV QNSKNDTILS KPEDAGGCIG TSDSRGHRKW  420
PSDDMEMSPD WHFPVQPSNH VVKGDCNIIL DSGSQTSMAL ATLSHAIVQE ALAKKQDVTI  480
EPLTVDNTHF RQNHNLTKDV TMASAFNDKI TIDKTIASHA EGNPSGNIVL GQKMAYHTDH  540
PGGSVMNPNV ADGIFRVKPR EDDRSMPGIN PVTTITPNMV TSEQITQLTN LSVSLAQYFG  600
NVQPLPQLYA SLSAHNVSEI PSFPYTDAPV GALGTLMKTS PIIECSKQHD STVCNSLEVK  660
KLEATKIPSD SLLNFIGQKS MTDAKDEVQL PIFPLSSDPS NKIVISAKET PNESDAINHG  720
KRAAEGEANN KKNGDGDNEN RTEAGANEDS EENDTTENAN GNDGVHDKKK GKDTKGIRAF  780
KFALVEFVKE LLKPTWKEGH ISKDVYKTIV KKVVDKVTGT LQGGHIPQTQ EKIDQYLSFS  840
KSKLTKLVQA YVDRVQKTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33835.14e-11C3H family protein