PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962674.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 411aa    MW: 47126.1 Da    PI: 10.0036
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962674.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.67e-161499898
                    -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                    +++l+ + l++pkkf+++hg+    s+ ++l+ ++g +W+v l  +  +++ ++l++GW +F++   L+ g  +vFk dg s+f    ++f+
  XP_022962674.1 14 HNNLEDRKLMIPKKFVKDHGE--LLSTSVRLKLPDGMEWKVGL--TTAPNGvVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTF--QTSIFD 99
                    55677778***********84..58999***************..77777779************************5554555..777776 PP
2B361.51.4e-19200286188
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+ v+++++v  +  +++pk+fae+h             ++l++++gr+W + ++ r++++  +++++GWk+Fv++n LkegD+ +F+l++++
  XP_022962674.1 200 FKIVMKQPNVRGKFAMIIPKDFAEKHlpddF------GIIKLQTPNGRKWPLLYKRRRNQENfVYFSSGWKRFVEENVLKEGDIGLFQLIKKD 286
                     677899999999**************64321......26***************775444446*************************99754 PP
3B3421.7e-133204031199
                     HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     +k+  l +p  fa+eh ++  +s +l++ +   r+W v l  r++++++ l++GW  F  +ngL++gD+++F+++++++  ++v++f++
  XP_022962674.1 320 HKKFVLNIPMVFAKEHFSSDMRSAKLQVGN---RQWIVAL--RQYGSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKH 403
                     5667799*********77767777777555...*******..*******************************9987666678888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MAASSPQFFR IVLHNNLEDR KLMIPKKFVK DHGELLSTSV RLKLPDGMEW KVGLTTAPNG  60
VVWLQNGWHK FAEHYSLEFG SLLVFKSDGF STFQTSIFDP SGVETEYCCI LNDSRAEFTM  120
EDEDSDENTE SSSQRLSKRK NKPSVPSPPQ SRKKMKAEEG CLIMKNMPKT EAGVSSRRQQ  180
FVNKLEAAQR FTSKSEKPSF KIVMKQPNVR GKFAMIIPKD FAEKHLPDDF GIIKLQTPNG  240
RKWPLLYKRR RNQENFVYFS SGWKRFVEEN VLKEGDIGLF QLIKKDIFSF TKLQDTSPFP  300
SPATKTRNPC FEANILNRRH KKFVLNIPMV FAKEHFSSDM RSAKLQVGNR QWIVALRQYG  360
SSVRLSAGWC LFYGDNGLED GDSCLFEMVD TKNCVFKVTI FKHVSSSASM D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.19e-31B3 family protein