PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022962482.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 385aa MW: 43526.4 Da PI: 6.8349

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022962482.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	3e-09	304	340	19	55
HHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 19 FeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_022962482.1 304 HNKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRH 340 34679*****************************885 PP
2	ELK	35.9	1.6e-12	260	281	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsgyL+sLkqE+s XP_022962482.1 260 ELKNHLLKKYSGYLSSLKQELS 281 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MEDQYNPHGD SSRGNFLFTS VPVLATNSSS PGGNFVTRHS SSNGGGASLL GSQIMAVNTN 60 LGGDCNFPAS DRVVKVEPSG SQSQNHHHHH QVHDFHYHLM REFQISSGGN NSNDLGSMKA 120 KIISHSLFSN LLQAFLDCQK VGAPPEVAAK LSSVWEEFEQ RRRSSMASTG GSTDPELDHF 180 MEAYYGMLVK YREELTRPIR EAADFMHRIE FQLNTLCNAS FQILASATEE KGWSEEEQEK 240 SREAEREVGD QMDPRAEERE LKNHLLKKYS GYLSSLKQEL SKKKKKGKLP KDARQELLRW 300 WELHNKWPYP SEAEKLALAE STGLDQKQIN NWFINQRKRH WKPSEDVQFM GMEGFYHPNA 360 AAAAAAAAFY FDGHFMGDSH YRLGP

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MEDQYNPHGD SSRGNFLFTS VPVLATNSSS PGGNFVTRHS SSNGGGASLL GSQIMAVNTN  60
LGGDCNFPAS DRVVKVEPSG SQSQNHHHHH QVHDFHYHLM REFQISSGGN NSNDLGSMKA  120
KIISHSLFSN LLQAFLDCQK VGAPPEVAAK LSSVWEEFEQ RRRSSMASTG GSTDPELDHF  180
MEAYYGMLVK YREELTRPIR EAADFMHRIE FQLNTLCNAS FQILASATEE KGWSEEEQEK  240
SREAEREVGD QMDPRAEERE LKNHLLKKYS GYLSSLKQEL SKKKKKGKLP KDARQELLRW  300
WELHNKWPYP SEAEKLALAE STGLDQKQIN NWFINQRKRH WKPSEDVQFM GMEGFYHPNA  360
AAAAAAAAFY FDGHFMGDSH YRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	9e-94	TALE family protein