PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022962481.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 386aa MW: 43597.5 Da PI: 6.8349

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022962481.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	3.1e-09	305	341	19	55
HHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 19 FeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_022962481.1 305 HNKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRH 341 34679*****************************885 PP
2	ELK	35.9	1.6e-12	261	282	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsgyL+sLkqE+s XP_022962481.1 261 ELKNHLLKKYSGYLSSLKQELS 282 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MEDQYNPHGD SSRGNFLFTS VPVLATNSSS PGGNFVTRHS SSNGGGASLL GSQIMAVNTN 60 LGGDCNFPAS DRVVKVEPSG SQSQNHHHHH QVHDFHYHLM REFQISSGGN NSNDLGSMKA 120 KIISHSLFSN LLQAFLDCQK VGAPPEVAAK LSSVWEEFEQ RRRSSMASTG GSTDPELDHF 180 MEAYYGMLVK YREELTRPIR EAADFMHRIE FQLNTLCNAS FQILASAATE EKGWSEEEQE 240 KSREAEREVG DQMDPRAEER ELKNHLLKKY SGYLSSLKQE LSKKKKKGKL PKDARQELLR 300 WWELHNKWPY PSEAEKLALA ESTGLDQKQI NNWFINQRKR HWKPSEDVQF MGMEGFYHPN 360 AAAAAAAAAF YFDGHFMGDS HYRLGP

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MEDQYNPHGD SSRGNFLFTS VPVLATNSSS PGGNFVTRHS SSNGGGASLL GSQIMAVNTN  60
LGGDCNFPAS DRVVKVEPSG SQSQNHHHHH QVHDFHYHLM REFQISSGGN NSNDLGSMKA  120
KIISHSLFSN LLQAFLDCQK VGAPPEVAAK LSSVWEEFEQ RRRSSMASTG GSTDPELDHF  180
MEAYYGMLVK YREELTRPIR EAADFMHRIE FQLNTLCNAS FQILASAATE EKGWSEEEQE  240
KSREAEREVG DQMDPRAEER ELKNHLLKKY SGYLSSLKQE LSKKKKKGKL PKDARQELLR  300
WWELHNKWPY PSEAEKLALA ESTGLDQKQI NNWFINQRKR HWKPSEDVQF MGMEGFYHPN  360
AAAAAAAAAF YFDGHFMGDS HYRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-93	TALE family protein