PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962477.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YC
Protein Properties Length: 140aa    MW: 15744.1 Da    PI: 6.5522
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962477.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC53.45.6e-1711911897
           NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97
                    + e+P+ rikki+k d+d+ ++ +ea  l+s a elf+  l+ +s   a e+kr+t+k   i  av+r + i dfl+d  p
  XP_022962477.1 11 RPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSSEVAAEKKRKTVKLEHIRIAVKRHQsIGDFLLDSLP 91
                    5689*********************************9999*************************9975277*****987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MAEEEPGEAI RPEFPMGRIK KIMKLDKDIG KVNSEALFLV SCATELFLEL LAEKSSEVAA  60
EKKRKTVKLE HIRIAVKRHQ SIGDFLLDSL PLPSQPSDAP AKDENRTRVV VDKVAPEGTR  120
RIDDFFRRPE KTASAETNET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.11e-41NF-YC family protein