PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022962477.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NF-YC | ||||||||
Protein Properties | Length: 140aa MW: 15744.1 Da PI: 6.5522 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 53.4 | 5.6e-17 | 11 | 91 | 18 | 97 |
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97 + e+P+ rikki+k d+d+ ++ +ea l+s a elf+ l+ +s a e+kr+t+k i av+r + i dfl+d p XP_022962477.1 11 RPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSSEVAAEKKRKTVKLEHIRIAVKRHQsIGDFLLDSLP 91 5689*********************************9999*************************9975277*****987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence |
MAEEEPGEAI RPEFPMGRIK KIMKLDKDIG KVNSEALFLV SCATELFLEL LAEKSSEVAA 60 EKKRKTVKLE HIRIAVKRHQ SIGDFLLDSL PLPSQPSDAP AKDENRTRVV VDKVAPEGTR 120 RIDDFFRRPE KTASAETNET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43250.1 | 1e-41 | NF-YC family protein |