PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022962449.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 676aa MW: 73673.1 Da PI: 6.9474

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022962449.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.8e-16	309	368	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022962449.1 309 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 368 78*****************988886678446***********************98 PP
2	AP2	45.9	1.4e-14	411	462	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s ++GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022962449.1 411 SVFRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 462 689*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
MKSMNENENN NNNNNNNNNS SSWLGFSLSP HMKMEVTASD HPYNHHHSHS ATNAFYLSPH 60 YNNNTEIFYG IAENASLHHS AAASLSVMPL KSDGSLCIME ALSRSQTEGM VPSSSPKLED 120 FLGGATMGGR GYFNQNAESE PDREHSLDLL HRPIRENQQQ QILMQNTHQY YSGLVPSSIG 180 IGGCDPQILP ADDDEIPCLR NWVSRSHYAG AHNNLDQQIT GGGGGALVHD GGSGGNSVSI 240 GGMSCGELQS LSLSMSPGSQ SSSFTASGQI SLTGGDGAVV ETKKRGPGKL CQKQPVHRKS 300 IDTFGQRTSQ YRGVTRHRWT GRYEAHLWDN SCKKEGQTRK GRQVYLGGYD MEEKAARAYD 360 LAALKYWGPS THINFPLENY QTELEEMKNM SRQEYVAHLR RKSSGFSRGA SVFRGVTRHH 420 QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGVNAVTNFD ISRYDVERIM 480 ASNTLLAGEL ARRNKEVVVD PRTDAAAAAV AYDSSVASNN NGGIEMNPDG NGTDWKMALY 540 QNPSHQQHQQ GAATCVAESL DHHHNKSMAS SGDYPNASFS MALQNLIGIE ALNTTNSHGI 600 EDDLNKQVTH FSNSSSLVTS LSSSREGSPD KANASMASKL IGATSGVGSW YPTPQQLRPT 660 AISMAHLPVF AAWNDT

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

MKSMNENENN NNNNNNNNNS SSWLGFSLSP HMKMEVTASD HPYNHHHSHS ATNAFYLSPH  60
YNNNTEIFYG IAENASLHHS AAASLSVMPL KSDGSLCIME ALSRSQTEGM VPSSSPKLED  120
FLGGATMGGR GYFNQNAESE PDREHSLDLL HRPIRENQQQ QILMQNTHQY YSGLVPSSIG  180
IGGCDPQILP ADDDEIPCLR NWVSRSHYAG AHNNLDQQIT GGGGGALVHD GGSGGNSVSI  240
GGMSCGELQS LSLSMSPGSQ SSSFTASGQI SLTGGDGAVV ETKKRGPGKL CQKQPVHRKS  300
IDTFGQRTSQ YRGVTRHRWT GRYEAHLWDN SCKKEGQTRK GRQVYLGGYD MEEKAARAYD  360
LAALKYWGPS THINFPLENY QTELEEMKNM SRQEYVAHLR RKSSGFSRGA SVFRGVTRHH  420
QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGVNAVTNFD ISRYDVERIM  480
ASNTLLAGEL ARRNKEVVVD PRTDAAAAAV AYDSSVASNN NGGIEMNPDG NGTDWKMALY  540
QNPSHQQHQQ GAATCVAESL DHHHNKSMAS SGDYPNASFS MALQNLIGIE ALNTTNSHGI  600
EDDLNKQVTH FSNSSSLVTS LSSSREGSPD KANASMASKL IGATSGVGSW YPTPQQLRPT  660
AISMAHLPVF AAWNDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-128	AP2 family protein