PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962319.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 263aa    MW: 29290.7 Da    PI: 5.5264
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962319.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.36.5e-1972167395
                     EE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS
              B3   3 kvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 
                     k+l++sdv++++r++lpkk ae+h   ++++e++ +t+ d++g  +W++k+++  +++s++yvl+ ++ +Fv+a+g++ gDf++ +  ++ ++ +
  XP_022962319.1  72 KELKNSDVSSLRRMILPKKAAETHlpTLESKEGIIITMDDLDGvHVWNFKYRFwpNNNSRMYVLE-NTGDFVNAHGIQLGDFILVY--QDfEDHS 163
                     8899**********************66677999*********99******9989999999***9.*****************999..5546665 PP

                     .EEE CS
              B3  92 lvvk 95 
                     +v++
  XP_022962319.1 164 YVIQ 167
                     5555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MMSIINQDHC PLQDVNHRLA AASPDLAAAV PGFGGGGVHR KKRMARQRRS SSNLHFSFPP  60
SSSSAHLPPP RKELKNSDVS SLRRMILPKK AAETHLPTLE SKEGIIITMD DLDGVHVWNF  120
KYRFWPNNNS RMYVLENTGD FVNAHGIQLG DFILVYQDFE DHSYVIQAKK ASDPEIYSDI  180
ANSCVMNGDI VFQDFNASKA ANSMYVPSST MDDPVSSFIY DTSSAFDNDS SFDFMSSSMT  240
NYSRMGGIEG FGSVENLSLD DFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.12e-65B3 family protein