PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962310.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 275aa    MW: 30804.6 Da    PI: 6.0292
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962310.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B362.66.3e-2082179195
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                     f+k+l++sdv++++r++lpkk ae+h   ++++e++ +t+ d++g  +W++k+++  +++s++yvl+ ++ +Fv+a+g++ gDf++ +  ++ ++
  XP_022962310.1  82 FQKELKNSDVSSLRRMILPKKAAETHlpTLESKEGIIITMDDLDGvHVWNFKYRFwpNNNSRMYVLE-NTGDFVNAHGIQLGDFILVY--QDfED 173
                     99**************************66677999*********99******9989999999***9.*****************999..55466 PP

                     E..EEE CS
              B3  90 felvvk 95 
                      ++v++
  XP_022962310.1 174 HSYVIQ 179
                     655555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MMSIINQDHC PLQDVNHRLA AASPDLAAAV PGFGGGGVHR KKRMARQRRS SSNLHFSFPP  60
SSSSAHLPPP RVIDPRRLKF LFQKELKNSD VSSLRRMILP KKAAETHLPT LESKEGIIIT  120
MDDLDGVHVW NFKYRFWPNN NSRMYVLENT GDFVNAHGIQ LGDFILVYQD FEDHSYVIQA  180
KKASDPEIYS DIANSCVMNG DIVFQDFNAS KAANSMYVPS STMDDPVSSF IYDTSSAFDN  240
DSSFDFMSSS MTNYSRMGGI EGFGSVENLS LDDFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.12e-74B3 family protein