PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022962269.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 464aa MW: 51456.5 Da PI: 5.4002

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022962269.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.4	9.9e-08	401	434	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 + +yp++e++++L +++gL+ +q+ +WF N+R + XP_022962269.1 401 NWPYPTEEDKAKLVQETGLQLKQINNWFINQRKR 434 469*****************************87 PP
2	ELK	26.3	1.7e-09	355	376	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y++++ ++++E++ XP_022962269.1 355 ELKHELKNGYKEKILDIREEIL 376 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MAFRNQLSQD LPLHYENQSQ PERPLSDNTL RSILSDQLTD HSPADDGSKP EHPLQSTPNW 60 LNSALLRNQA PHSHFSDETT ATAADNVDTD FLNLHTTAAN SAVSHPSGQW LSRAILHRDH 120 SDVLDEVADA ADAMIGATTL SRESDDLKNN SSGGGGEGVN NSDDVAVESD GNEGAYGGDA 180 AMNWQNARFK AEILAHPLYE QLLSAHVACL RIATPVDQLP RVDSQLARSQ NVAAKYSSFG 240 HRSQPIAGNG KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVYACWEIE QSLQSLTGVS 300 PGEGTGATMS DDDEDQTDSD ANLFDGSFEG HDAMGFGPLI PTDSERSLME RVRHELKHEL 360 KNGYKEKILD IREEILRKRR AGKLPGDTTS VLKAWWQSHS NWPYPTEEDK AKLVQETGLQ 420 LKQINNWFIN QRKRNWHTNP STSTTLKTKR KRSNAGEATG NNHP

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MAFRNQLSQD LPLHYENQSQ PERPLSDNTL RSILSDQLTD HSPADDGSKP EHPLQSTPNW  60
LNSALLRNQA PHSHFSDETT ATAADNVDTD FLNLHTTAAN SAVSHPSGQW LSRAILHRDH  120
SDVLDEVADA ADAMIGATTL SRESDDLKNN SSGGGGEGVN NSDDVAVESD GNEGAYGGDA  180
AMNWQNARFK AEILAHPLYE QLLSAHVACL RIATPVDQLP RVDSQLARSQ NVAAKYSSFG  240
HRSQPIAGNG KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVYACWEIE QSLQSLTGVS  300
PGEGTGATMS DDDEDQTDSD ANLFDGSFEG HDAMGFGPLI PTDSERSLME RVRHELKHEL  360
KNGYKEKILD IREEILRKRR AGKLPGDTTS VLKAWWQSHS NWPYPTEEDK AKLVQETGLQ  420
LKQINNWFIN QRKRNWHTNP STSTTLKTKR KRSNAGEATG NNHP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	432	452	RKRNWHTNPSTSTTLKTKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-161	TALE family protein